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rad longread® contig assembly  (Floragenex)

 
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    Floragenex rad longread® contig assembly
    Rad Longread® Contig Assembly, supplied by Floragenex, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/rad+longread+%C2%AE+contig+assembly/rad+longread+++contig+assembly/10__17660_slash_actahortic__2016__1145__1-40-10-14
    Average 90 stars, based on 1 article reviews
    rad longread® contig assembly - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    Generated:

    Article Title: RAD tag sequencing as a source of SNP markers in Cynara cardunculus L
    Article Snippet: A RAD LongRead ® contig assembly was generated by a set of algorithms developed at Floragenex Inc. Sequences having more than 5 bases with poor Illumina quality scores (Phred10 or lower) were discarded.

    Comparison:

    Article Title: RAD tag sequencing as a source of SNP markers in Cynara cardunculus L
    Article Snippet: A RAD LongRead ® contig assembly was generated by a set of algorithms developed at Floragenex Inc. Sequences having more than 5 bases with poor Illumina quality scores (Phred10 or lower) were discarded.

    Sequencing:

    Article Title: RAD tag sequencing as a source of SNP markers in Cynara cardunculus L
    Article Snippet: A RAD LongRead ® contig assembly was generated by a set of algorithms developed at Floragenex Inc. Sequences having more than 5 bases with poor Illumina quality scores (Phred10 or lower) were discarded.



    Similar Products

    rad longread® contig assembly  (Floragenex)
    90
    Floragenex rad longread® contig assembly
    Rad Longread® Contig Assembly, supplied by Floragenex, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/rad+longread+%C2%AE+contig+assembly/rad+longread+++contig+assembly/10__17660_slash_actahortic__2016__1145__1-40-10-14
    Average 90 stars, based on 1 article reviews
    rad longread® contig assembly - by Bioz Stars, 2026-10
    90/100 stars
    		  Buy from Supplier
    rad longread ® contig assembly  (Floragenex)
    90
    Floragenex rad longread ® contig assembly
    <t>Contig</t> length distribution and the efficiency of SNP discovery . Red bars represent the portion of contigs having no SNP identified, while green bars represent contigs harbouring at least one SNP.
    Rad Longread ® Contig Assembly, supplied by Floragenex, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/rad+longread+%C2%AE+contig+assembly/rad+longread+++contig+assembly/pmc03269995-135-1-15
    Average 90 stars, based on 1 article reviews
    rad longread ® contig assembly - by Bioz Stars, 2026-10
    90/100 stars
    		  Buy from Supplier

    Image Search Results


    Contig length distribution and the efficiency of SNP discovery . Red bars represent the portion of contigs having no SNP identified, while green bars represent contigs harbouring at least one SNP.

    Journal: BMC Genomics

    Article Title: RAD tag sequencing as a source of SNP markers in Cynara cardunculus L

    doi: 10.1186/1471-2164-13-3

    Figure Lengend Snippet: Contig length distribution and the efficiency of SNP discovery . Red bars represent the portion of contigs having no SNP identified, while green bars represent contigs harbouring at least one SNP.

    Article Snippet: A RAD LongRead ® contig assembly was generated by a set of algorithms developed at Floragenex Inc. Sequences having more than 5 bases with poor Illumina quality scores (Phred10 or lower) were discarded.

    Techniques:

    Comparison of K-mer spectra in the C. cardunculus RAD contig assembly vs the full genomes of A. thaliana , V. vinifera and F. vesca . K-mer (k = 10) distribution for C. cardunculus (A) was evaluated both on pre-assembly sequence data (outer box) and contig sequences (inner box). K-mer populations have been split on the basis of their CpG content. × axis represents the number of occurrences of a given 10-mer; Y axis reports the amount of different 10-mers reporting that occurrence count.

    Journal: BMC Genomics

    Article Title: RAD tag sequencing as a source of SNP markers in Cynara cardunculus L

    doi: 10.1186/1471-2164-13-3

    Figure Lengend Snippet: Comparison of K-mer spectra in the C. cardunculus RAD contig assembly vs the full genomes of A. thaliana , V. vinifera and F. vesca . K-mer (k = 10) distribution for C. cardunculus (A) was evaluated both on pre-assembly sequence data (outer box) and contig sequences (inner box). K-mer populations have been split on the basis of their CpG content. × axis represents the number of occurrences of a given 10-mer; Y axis reports the amount of different 10-mers reporting that occurrence count.

    Article Snippet: A RAD LongRead ® contig assembly was generated by a set of algorithms developed at Floragenex Inc. Sequences having more than 5 bases with poor Illumina quality scores (Phred10 or lower) were discarded.

    Techniques: Comparison, Sequencing